Platform
Our instruments sit in our own lab at the Center for Virology and Vaccine Research, on the 10th floor of the Center for Life Science in Boston.
Together they carry one specimen from tissue processing through spatial protein and RNA maps to functional single-cell assays, all in house.
In the lab
-
Akoya PhenoCycler-Fusion
Whole-slide imaging of more than 50 proteins, two slides at a time.
-
CODEX
Two CODEX systems, each on a Keyence BZ-X810 microscope, for high-plex protein imaging.
-
CosMx Spatial Molecular Imager
Single-cell spatial transcriptomics on archival tissue.
-
GeoMx Digital Spatial Profiler
Whole-transcriptome profiling of tissue regions chosen from tissue stains.
-
LUMICKS z-Movi
Measures how strongly single immune cells bind their targets. We are a LUMICKS Center of Excellence.
-
Computing
Meet Boba Fett, Ceethreepo Plus and Darth Vader, our on-site compute and storage nodes, with >250 CPU threads, >4 TB of RAM, NVIDIA H200 GPUs and >1 PB of storage.
Also in the lab: a histology suite for tissue processing, a molecular biology and in situ hybridization bench, vacuum desiccators for tissue and slide storage, a 10x Genomics Visium CytAssist for whole-transcriptome spatial capture, including multi-omic approaches developed in house, and an Emulate organ-on-chip system for functional tissue models.
Join us
We are always looking for talented future colleagues on both the computational and experimental sides.